The research from the Department of Biology results in numerous publications each year. Here we identify publications in peer-reviewed journals over the past three years.
2023
September 2023
- Betters, M., Stabbins, A., Keller, A., & Cordes, E. (2023) Biogeography and depth partitioning in deep‐sea gastropods at the Pacific Costa Rica Margin. Journal of Biogeography.
- Craig, J.M., Kumar, S. and Hedges, S.B. (2023) The origin of eukaryotes and rise in complexity were synchronous with the rise in oxygen. Frontiers in Bioinformatics 3.
- Darbinian, N., Gallia, G.L., Darbinyan, A., Vadachkoria, E., Merabova, N., Moore, A., Goetzl, L., Amini, S. and Selzer, M.E. (2023) Effects of In Utero EtOH Exposure on 18S Ribosomal RNA Processing: Contribution to Fetal Alcohol Spectrum Disorder. International Journal of Molecular Sciences 24 (18), 13714.
- Inzaule, S.C., Siedner, M.J., Little, S.J., Avila-Rios, S., Ayitewala, A., Bosch, R.J., Calvez, V., Ceccherini-Silberstein, … Sergei L. Kosakovsky Pond … Robert W. ShaferI (2023) Recommendations on data sharing in HIV drug resistance research. PLoS medicine 20 (9), e1004293.
- Russo, V., Falco, L., Tessitore, V., Mauriello, A., Catapano, D., Napolitano, N., Tariq, M., Caturano, A., Ciccarelli, G., D’Andrea, A. and Giordano, A. (2023) Anti-Inflammatory and Anticancer Effects of Anticoagulant Therapy in Patients with Malignancy. Life 13 (9), 1888.
- Vieira, L.M.D.C., Pereira, P.H.O., da Rocha Vilela, D.A., Landau, I., Pacheco, M.A., Escalante, A.A., Ferreira, F.C. and Braga, É.M., (2023) Leucocytozoon cariamae n. sp. and Haemoproteus pulcher coinfection in Cariama cristata (Aves: Cariamiformes): First mitochondrial genome analysis and morphological description of a leucocytozoid in Brazil.. Parasitology, 1-41.
August 2023
- Belouard, N., & Behm, J. E. (2023). Multiple paternity in the invasive spotted lanternfly (Hemiptera: Fulgoridae). Environmental Entomology, nvad083.
- Carvalho, N. F., Waters, L.G., Arantes, R. C. M., Couto, D. M., Cavalcanti, G. H., Güth, A. Z., Falcão, A. P. C., Nagata, P. D., Hercos, C. M., Sasaki, D. K., Dottori, M., Cordes, E. E., & Sumida, P. Y. G. (2023). Underwater surveys reveal deep-sea corals in newly explored regions of the southwest Atlantic. Communications Earth & Environment, 4(1), 282.
- Caturano, A., D’Angelo, M., Mormone, A., Russo, V., Mollica, M. P., Salvatore, T., Galiero, R., Rinaldi, L., Vetrano, E., Marfella, R., Monda, M., Giordano, A., & Sasso, F. C. (2023). Oxidative Stress in Type 2 Diabetes: Impacts from Pathogenesis to Lifestyle Modifications. Current Issues in Molecular Biology, 45(8), 6651-6666.
- Darbinian, N., Darbinyan, A., Merabova, N., Kassem, M., Tatevosian, G., Amini, S., ... & Selzer, M. E. (2023). In utero ethanol exposure induces mitochondrial DNA damage and inhibits mtDNA repair in developing brain. Frontiers in Neuroscience, 17.
- Harman, J., Hipsley, C. A., Jacobus, L. M., Liberles, D. A., Settele, J., & Traulsen, A. (2023). 2023 BMC Ecology and Evolution image competition: the winning images. BMC Ecology and Evolution, 23(1), 1-7.
- Li, C., Xu, A.J., Beery, E., Hsieh, S.T. and Kane, S.A. (2023) Putting a new spin on insect jumping performance using 3D modeling and computer simulations of spotted lanternfly nymphs. Journal of Experimental Biology
- Miura, S., Dolker, T., Sanderford, M., & Kumar, S. (2023). Improving cellular phylogenies through the integrated use of mutation order and optimality principles. Computational and Structural Biotechnology Journal.
- Zhang, C., Yue, S., Panagiotopoulos, A. Z., Klein, M. L., & Wu, X. (2023). Why Dissolving Salt in Water Decreases Its Dielectric Permittivity. Physical Review Letters, 131(7), 076801.
July 2023
- Barba-Montoya, Jose, Sudip Sharma, Sudhir Kumar (2023) Molecular timetrees using relaxed clocks and uncertain phylogenies.Frontiers in Bioinformatics 3, 1225807.
- Carroll, Elizabeth W. , Amy L. Freestone (2023) Habitat isolation interacts with top-down and bottom-up processes in a seagrass ecosystem.Plos one 18 (7), e0289174.
- Chmielewski, Matthew W., Skyler Naya, Monica Borghi, Jen Cortese, Alisdair R. Fernie, Mark T. Swartz, Konstantina Zografou, Brent J. Sewall, Rachel B. Spigler (2023) Phenology and foraging bias contribute to sex‐specific foraging patterns in the rare declining butterfly Argynnis idalia idalia.Ecology and Evolution 13 (7), e10287.
- Darbinian, Nune, Emily C. Sparks, Armine Darbinyan, Nana Merabova, Gabriel Tatevosian, Ekaterina Vadachkoria, Huaqing Zhao, Shohreh Amini, Laura Goetzl, Michael E. Selzer. (2023) Maternal Blood Lipid Biomarkers of Oligodendrocyte Pathology to Predict Fetal Alcohol Spectrum Disorders.Obstetrics and Gynecology Research 6 (2), 127-138.
- Darbinian, Nune, Emily C. Sparks, Armine Darbinyan, Nana Merabova, Tamara Tatevosian-Geller, Katie Calaku, Sarah Bachman, Huaqing Zhao, Shohreh Amini, Laura Goetzl, Solomon P. Samuel, Amer Samdani, Michael E. Selzer.(2023) Exosomal Lipid Biomarkers of Oligodendrocyte Pathology to Predict Scoliosis in Children with Cerebral Palsy.Obstetrics and Gynecology Research 6 (2), 160-171.
- Feitelson, Mark A., Alla Arzumanyan, Arvin Medhat & Ira Spector (2023) Short-chain fatty acids in cancer pathogenesis.Cancer and Metastasis Reviews, 1-22.
- Joyce, Collin, Sasha Murrell, Ben Murrell, Oluwarotimi Omorodion, Lorena S. Ver, Nancy Carrico, Raiza Bastidas, Rebecca Nedellec, Michael Bick, Jordan Woehl, Fangzhu Zhao, Alison Burns, Shawn Barman, Michael Appel, Alejandra Ramos, Lalinda Wickramasinghe, Kemal Eren, Thomas Vollbrecht, Davey M. Smith, Sergei L. Kosakovsky Pond, Ryan McBride, Charli Worth, Facundo Batista, Devin Sok, The IAVI Protocol C Investigators & The IAVI African HIV Research Network , Pascal Poignard, Bryan Briney, Ian A. Wilson, Elise Landais , Dennis R. Burton (2023) Antigen pressure from two founder viruses induces multiple insertions at a single antibody position to generate broadly neutralizing HIV antibodies.PLoS Pathogens 19 (6), e1011416.
- Junod, Samuel L., Mark Tingey, Joseph M. Kelich, Alexander Goryaynov, Karl Herbine, Weidong Yang (2023) Dynamics of nuclear export of pre-ribosomal subunits revealed by high-speed single-molecule microscopy in live cells. iScience.
- Luzuriaga-Neira, Agusto R., Andrew M. Ritchie, Bryan L. Payne, Oliver Carrillo-Parramon, David A. Liberles, and David Alvarez-Ponce (2023) Highly Abundant Proteins Are Highly Thermostable.Genome Biology and Evolution 15 (7), evad112.
- Means, D. Bruce, Matthew P. Heinicke, S. Blair Hedges, Ross D. Macculloch, Amy Lathrop (2023) Exceptional diversity of Pristimantis Landfrogs (Anura: Terraranae) on the Wokomung Massif, Guyana, with descriptions of three new species.Journal of Vertebrate Biology 72 (23026), 23026.1-26.
- Ose, Nicholas J., Paul Campitelli, Ravi Patel, Sudhir Kumar, S. Banu Ozkan (2023) Protein dynamics provide mechanistic insights about epistasis among common missense polymorphisms.Biophysical journal.
- Phophi, Lufuno, Mohamed A. Abouelkhair, Rebekah Jones, Jordan Zehr, Stephen A. Kania (2023) Temporal changes in antibiotic resistance and population structure of methicillin-resistant Staphylococcus pseudintermedius between 2010 and 2021 in the United States.Comparative Immunology, Microbiology and Infectious Diseases, 102028.
- Princiotta, Sarah DeVaul, Andrew VanKuren, Craig E. Williamson, Robert W. Sanders, Macarena S. Valiñas (2023) Disentangling the role of light and nutrient limitation on bacterivory by mixotrophic nanoflagellates. Journal of Phycology.
- Ventura, E., Belfiore, A., Iozzo, R.V., Giordano, A. and Morrione, A. (2023) Progranulin and EGFR modulate RYK (Receptor like Tyrosine Kinase) sorting and stability in mesothelioma cell. American Journal of Physiology-Cell Physiology 325(2), C391-C405
- Zhang, J., Kumar, S.,(2023) Masatoshi Nei (1931–2023). Nature Ecology & Evolution, 1-2.
June 2023
- Barone, D., Iannuzzi, C. A., Forte, I. M., Ragosta, M. C., Cuomo, M., Dell’Aquila, M., et al. [Antonio Giordano] (2023). The hydrophilic extract from a new tomato genotype (named DHO) kills cancer cell lines through the modulation of the DNA damage response induced by Campthotecin treatment. Front. Oncol. 13, 1117262.
- Cao, A., Li, Q., Yang, W., and Zhang, Z. (2023). Frequency shifting of transmitted ultrasound in thick composites containing fiber wrinkles and its application in non-destructive evaluation. Compos. Struct. 314, 116939.
- Chikelu, C. W., Berns, M., Conover, D., Habas, R., Han, L., Street, R. M., et al. (2023). Collagen Nanoyarns: Hierarchical Three-Dimensional Biomaterial Constructs. Biomacromolecules 24, 1155–1163.
- Curigliano, G., Shapiro, G. I., Kristeleit, R. S., Abdul Razak, A. R., Leong, S., Alsina, M., et al. [Antonio Giordano] (2023). A Phase 1B open-label study of gedatolisib (PF-05212384) in combination with other anti-tumour agents for patients with advanced solid tumours and triple-negative breast cancer. Br. J. Cancer 128, 30–41.
- Curigliano, G., Shapiro, G. I., Kristeleit, R. S., Razak, A. R. A., Leong, S., Alsina, M., et al. [Antonio Giordano] (2023). Correction to: A Phase 1B open-label study of gedatolisib (PF-05212384) in combination with other anti-tumour agents for patients with advanced solid tumours and triple-negative breast cancer. Br. J. Cancer 128, 400.
- DelloStritto, M. J., Kaplan, A. D., Perdew, J. P., and Klein, M. L. (2023). Predicting the properties of NiO with density functional theory: Impact of exchange and correlation approximations and validation of the r2SCAN functional. APL Mater. 11.
- Esposito, A., Menna, D., Giordano, A. N., and Cappiello, A. P. (2023). Adjunctive techniques in endovascular repair of postcarotid endarterectomy pseudoaneurysm: Case report and literature review. Catheter. Cardiovasc. Interv. 101, 900–906.
- Fanale, D., Brando, C., Corsini, L. R., Cutaia, S., Di Donna, M. C., Randazzo, U., et al. [Antonio Giordano] (2023). Low plasma PD-L1 levels, early tumor onset and absence of peritoneal carcinomatosis improve prognosis of women with advanced high-grade serous ovarian cancer. BMC Cancer 23, 437.
- Huzar, J., Shenoy, M., Sanderford, M. D., Kumar, S., and Miura, S. (2023). Bootstrap confidence for molecular evolutionary estimates from tumor bulk sequencing data. Front. Bioinforma. 3, 1090730.
- Incorvaia, L., Dimino, A., Algeri, L., Brando, C., Magrin, L., De Luca, I., et al. [Antonio Giordano] (2023). Body mass index and baseline platelet count as predictive factors in Merkel cell carcinoma patients treated with avelumab. Front. Oncol. 13, 1141500.
- Millette, N. C., Gast, R. J., Luo, J. Y., Moeller, H. V, Stamieszkin, K., Andersen, K. H., et al. [Robert W Sanders] (2023). Mixoplankton and mixotrophy: future research priorities. J. Plankton Res., fbad020.
- Ruiz-Whalen, D. M., Aichele, C. P., Dyson, E. R., Gallen, K. C., Stark, J. V, Saunders, J. A., et al. [Raymond Habas] (2023). “Gaining Wings to FLY: Using Drosophila Oogenesis as an Entry Point for Citizen Scientists in Laboratory Research,” in Drosophila Oogenesis: Methods and Protocols (Springer), 399–444.
- Scalia, P., Williams, S. J., Suma, A., and Carnevale, V. (2023). The DTX Protein Family: An Emerging Set of E3 Ubiquitin Ligases in Cancer. Cells 12, 1680.
- Tian, J., Liu, M., Xiao, H., Zhang, Z., Yang, W., Long, Z., et al. (2023). Optimized ultrasonic total focusing imaging of diverse and multiple defects in crossply CFRP: Floquet wave theory, numerical simulation, and experimental validation. Mech. Syst. Signal Process. 199, 110486.
- Wang, X., Xu, T., Peckmann, J., Bayon, G., Jia, Z., Gong, S., et al. [Erik Cordes] (2023). Molybdenum isotope signature of microbial nitrogen utilization in siboglinid tubeworms. Geology.
- Yu, W., Rush, C., Tingey, M., Junod, S., and Yang, W. (2023). Application of Super-resolution SPEED Microscopy in the Study of Cellular Dynamics. Chem. \& Biomed. Imaging.
- Zhang, Z., Cao, A., Li, Q., Yang, W., and Li, Y. (2023). Imaging of Fiber Waviness in Thick Composites with Unknown Material Properties Using Probability-Based Ultrasound Non-Reciprocity. Materials (Basel). 16, 3786.
May 2023
- Chothe, S. K., Jakka, P., Boorla, V. S., Ramasamy, S., Gontu, A., Nissly, R. H., et al. [Brent Sewal] (2023). Little Brown Bats (Myotis lucifugus) Support the Binding of SARS-CoV-2 Spike and Are Likely Susceptible to SARS-CoV-2 Infection. Viruses 15, 1103.
- Dash, P. K., Chen, C., Kaminski, R., Su, H., Mancuso, P., Sillman, B., et al. [Shohreh Amini] (2023). CRISPR editing of CCR5 and HIV-1 facilitates viral elimination in antiretroviral drug-suppressed virus-infected humanized mice. Proc. Natl. Acad. Sci. 120, e2217887120.
- Di Fiore, R., Suleiman, S., Drago-Ferrante, R., Subbannayya, Y., Suleiman, S., Vasileva-Slaveva, M., et al. [Antonio Giordano] (2023). The Role of FBXW7 in Gynecologic Malignancies. Cells 12, 1415.
- Escalera-Zamudio, M., Kosakovsky Pond, S. L., de la Viña, N., Gutiérrez, B., Inward, R. P. D., Thézé, J., et al. (2023). Identification of evolutionary trajectories shared across human betacoronaviruses. Genome Biol. Evol., evad076.
- Feitelson, M., and Arzumanyan, A. (2023). Liver Cancer. Rijeka: IntechOpen doi:10.5772/intechopen.100845.
- Kagawa, S., Tanabe, K., Hiromura, M., Ogawa, K., Koga, T., Maeda, T., et al. [Antonio Giordano] (2023). Hachimijiogan, a traditional herbal medicine, modulates adipose cell function and ameliorates diet-induced obesity and insulin resistance in mice. Front. Pharmacol. 14. doi:10.3389/fphar.2023.1167934.
- Kaiser, S., Stransky, B., Jennings, R. M., Kihara, T. C., and Brix, S. (2023). Combining morphological and mitochondrial DNA data to describe a new species of Austroniscus Vanhöffen, 1914 (Isopoda, Janiroidea, Nannoniscidae) linking abyssal and hadal depths of the Puerto Rico Trench. Zootaxa 5293, 401–434. doi:10.11646/zootaxa.5293.3.1.
- Liguori, G., Costagliola, A., Lombardi, R., Paciello, O., and Giordano, A. (2023). Human-Animal Interaction in Animal-Assisted Interventions (AAI) s: Zoonosis Risks, Benefits, and Future Directions—A One Health Approach. Animals 13, 1592.
- Liu, H., Chen, C., Liao, S., Sohaii, D. K., Cruz, C. R. Y., Burdo, T. H., et al. [Shohreh Amini] (2023). Strategic self-limiting production of infectious HIV particles by CRISPR in permissive cells. Mol. Ther. Acids.
- Pacheco, M. A., and Escalante, A. A. (2023). Origin and diversity of malaria parasites and other Haemosporida. Trends Parasitol. doi:10.1016/j.pt.2023.04.004.
- Wilson, A. E., and Liberles, D. A. (2023). Dosage balance acts as a time-dependent selective barrier to subfunctionalization. BMC Ecol. Evol. 23, 14.
- Yamamoto, K., Ohsiro, Y., Suzuki, T., Suzuki, M., Miura, S., Nagashima, M., et al. (2023). Validation of the severe COVID-19 prognostic value of serum IL-6, IFN-$λ$3, CCL17, and calprotectin considering the timing of clinical need for prediction. PLoS One 18, e0279897.
April 2023
- Benvenuto, M., Angiolini, V., Focaccetti, C., Nardozi, D., Palumbo, C., Carrano, R., et al. [Luciano Mutti] (2023). Antitumoral effects of Bortezomib in malignant mesothelioma: evidence of mild endoplasmic reticulum stress in vitro and activation of T cell response in vivo. Biol. Direct 18, 1–20.
- Blum, T. G., Morgan, R. L., Durieux, V., Chorostowska-Wynimko, J., Baldwin, D. R., Boyd, J., et al. [Luciano Mutti] (2023). European Respiratory Society guideline on various aspects of quality in lung cancer care. Eur. Respir. J. 61.
- Dai, T., Du, Y., Cromley, J., Fechter, T., and Nelson, F. (2023). Analytic Approaches to Handle Missing Data in Simple Matrix Sampling Planned Missing Designs. J. Exp. Educ., 1–28.
- Farshad, M., DelloStritto, M. J., Suma, A., and Carnevale, V. (2023). Detecting Liquid--Liquid Phase Separations Using Molecular Dynamics Simulations and Spectral Clustering. J. Phys. Chem. B.
- Hazra, A., O’Hara, A., Polyak, K., Nakhlis, F., Harrison, B. T., Giordano, A., et al. (2023). Copy Number Variation in Inflammatory Breast Cancer. Cells 12, 1086.Liberles, D. A. (2023). A Genomic Conceptualization of Species. J. Mol. Evol., 1–3.
- Pentimalli, F., Krstic-Demonacos, M., Costa, C., Mutti, L., and Bakker, E. (2023). Intratumor microbiota as a novel potential prognostic indicator in mesothelioma. Front. Immunol. 14.
- Rahouma, M., Baudo, M., Zhang, J., and Mutti, L. (2023). Editorial: Prognostic factors in non-small cell lung cancer. Front. Oncol. 13. doi:10.3389/fonc.2023.1174625.
- Ren, W., Yuan, Y., Li, Y., Mutti, L., Peng, J., and Jiang, X. (2023). The function and clinical implication of YTHDF1 in the human system development and cancer. Biomark. Res. 11, 1–13.
- Scalia, P., Merali, C., Barrero, C., Suma, A., Carnevale, V., Merali, S., et al. (2023). Novel Isoform DTX3c Associates with UBE2N-UBA1 and Cdc48/p97 as Part of the EphB4 Degradation Complex Regulated by the Autocrine IGF-II/IRA Signal in Malignant Mesothelioma. Int. J. Mol. Sci. 24, 7380.
- Spitz, S., Cremer, I., Kotwal, A., Correale, P., Botta, C., Fameli, A., et al. [Antonio Giordano] (2023). Giuseppe Giaccone, Cornell University, United States. Progn. factors non-small cell lung cancer, 448.
- Tang, P. K., Khatua, P., Carnevale, V., and Loverde, S. M. (2023). Exploration of the Nucleation Pathway for Supramolecular Fibers. J. Chem. Inf. Model.
- Tao, K., Rhee, S.-Y., Tzou, P. L., Osman, Z. A., Pond, S. L. K., Holmes, S. P., et al. (2023). HIV-1 Group M Capsid Amino Acid Variability: Implications for Sequence Quality Control of Genotypic Resistance Testing. Viruses 15, 992.
- Tossetta, G., Fantone, S., Busilacchi, E. M., Di Simone, N., Giannubilo, S. R., Scambia, G., et al. [Antonio Giordano] (2023). Correction to: Modulation of matrix metalloproteases by ciliary neurotrophic factor in human placental development. Cell Tissue Res.
- Ventura, E., Iozzo, R., Belfiore, A., Giordano, A., and Morrione, A. (2023). Progranulin modulates RYK and EGFR activity in mesothelioma cells. J. Biol. Chem. 299, S731.
- Zhang, S., Srivastava, A., Li, W., Rijpkema, S. J., Carnevale, V., Klein, M. L., et al. (2023). Molecular Engineering of pH-Responsive Anchoring Systems onto Poly (ethylene glycol) Corona. J. Am. Chem. Soc.
March 2023
- Albukhaytan, H., Torkzaban, B., Sariyer, I. K., and Amini, S. (2023). PurA sensitizes cells to toxicity induced by oxidative stress. NeuroImmune Pharmacol. Ther.
- Boudeau, S., Ramakodi, M. P., Zhou, Y., Liu, J. C., Ragin, C., and Kulathinal, R. J. (2023). Extensive set of African ancestry-informative markers (AIMs) to study ancestry and population health. Front. Genet. 14.
- Levin, L. A., Alfaro-Lucas, J. M., Colaço, A., Cordes, E. E., Craik, N., Danovaro, R., et al. (2023). Deep-sea impacts of climate interventions. Science (80-. ). 379, 978–981.
- Ponce-Chazarri, L., Ponce-Blandón, J. A., Immordino, P., Giordano, A., and Morales, F. (2023). Barriers to Breast Cancer-Screening Adherence in Vulnerable Populations. Cancers (Basel). 15, 604.
- Ruba, A., Tingey, M., Luo, W., Yu, J., Evangelou, A., Higgins, R., et al. [Weidong Yang] (2023). The Ciliary Lumen Accommodates Passive Diffusion and Vesicle-Assisted Trafficking in Cytoplasm-Ciliary Transport. Mol. Biol. Cell, mbc--E22.
- Silva, S. R., Miranda, V. F. O., Michael, T. P., Płachno, B. J., Matos, R. G., Adamec, L., et al. [Sergei Pond] (2023). The phylogenomics and evolutionary dynamics of the organellar genomes in carnivorous Utricularia and Genlisea species (Lentibulariaceae). Mol. Phylogenet. Evol., 107711.
- Ventura, E., Ducci, G., Benot Dominguez, R., Ruggiero, V., Belfiore, A., Sacco, E., et al. [Andrea Morrione, Antonio Giordano] (2023). Progranulin Oncogenic Network in Solid Tumors. Cancers (Basel). 15, 1706.
- Yang, W., Liu, M., Chen, S., Kang, W., Chen, J., and Li, Y. (2023). Electromechanical analysis of a self-sensing torsional micro-actuator based on CNTs reinforced piezoelectric composite with damage. Compos. Struct., 116945.
February 2023
- Belouard, N., and Behm, J. E. (2023). Spotted! Computer-aided individual photo-identification allows for mark-recapture of invasive spotted lanternfly (Lycorma delicatula). Front. Insect Sci. 3, 9.
- Bien, T., Alexander, B.H., White, E., Hsieh, S.T. and Kane, S.A. (2023) Sizing up spotted lanternfly nymphs for instar determination and growth allometry. Plos one 18 (2), e0265707
- Bravo, M. E., Brandt, M. I., Der Grient, V., Jesse, M. A., Dahlgren, T. G., Esquete Garrote, P., et al. [Erik Cordes] (2023). Insights from the management of offshore energy resources: Towards an ecosystem-services based management approach for deep-ocean industries. Front. Mar. Sci. 9, 2576.
- Chebaane, S., Freestone, A. L., Des Pérez, A., Sempere-Valverde, J., Chainho, P., Monteiro, J. G., et al. (2023). Predation facilitates the abundance of biofouling non-indigenous species in estuarine marinas in NE Atlantic Portugal. Mar. Pollut. Bull. 188, 114724.
- Coronel, L., Vouga, A. G., Rothberg, B. S., and Carnevale, V. (2023). Role of lipids in hydrophobic gating and blocker affinity in BK channels. Biophys. J. 122, 13a.
- Flammia, R. S., Tufano, A., Chierigo, F., Würnschimmel, C., Hoeh, B., Sorce, G., et al. [Andrea Morrione] (2023). The Effect of Sex on Disease Stage and Survival after Radical Cystectomy in Non-Urothelial Variant-Histology Bladder Cancer. J. Clin. Med. 12, 1776.
- Junod, S. L., and Yang, W. (2023). The role of O-GlcNAcylation in mRNA nuclear export studied by single-molecule super-resolution microscopy. Biophys. J. 122, 193a.
- Junod, S. L., Tingey, M., Rush, C., Alkurdi, A., Bajoria, K., and Yang, W. (2023). Obtaining 3D super-resolution images by utilizing rotationally symmetric structures and 2D-to-3D transformation. Comput. Struct. Biotechnol. J.
- Malavazos, A. E., Iacobellis, G., Dozio, E., Basilico, S., Di Vincenzo, A., Dubini, C., et al. [Antonio Giordano] (2023). Human Epicardial Adipose Tissue Expresses Glucose-dependent Insulinotropic Polypeptide, Glucagon and Glucagon-Like Peptide 1 Receptors as Potential Targets of Pleiotropic Therapies. Eur. J. Prev. Cardiol., zwad050.
- Nardone, V., Romeo, C., D’Ippolito, E., Pastina, P., D’Apolito, M., Pirtoli, L., et al. [Luciano Mutti, Antonio Giordano] (2023). The role of brain radiotherapy for EGFR-and ALK-positive non-small-cell lung cancer with brain metastases: a review. Radiol. Med., 1–14.
- Sewall, B. J., Turner, G. G., Scafini, M. R., Gagnon, M. F., Johnson, J. S., Keel, M. K., et al. (2023). Environmental control reduces white-nose syndrome infection in hibernating bats. Anim. Conserv.
- Stopar, A., and Nicholson, A. W. (2023). Multivalent forms of the ribonuclease H1 hybrid binding domain are high-affinity binders of RNA--DNA hybrids. FEBS Lett. 597, 472–482.
- Suma, A., Sigg, D., Srivastava, A., Gonnella, G., and Carnevale, V. (2023). Channel-lipid interactions drive the emergence of ion channel clustering, channel-channel cooperativity, and activation hysteresis. Biophys. J.122, 29a.
- Tingey, M., Yang, W., Zhang, B., Ruba, A., and Junod, S. (2023). Paired-objectives photon enhancement (POPE) microscopy. Biophys. J. 122, 127a.
- Troisi, N., Saratzis, A., Katsogridakis, E., Stavroulakis, K., Berchiolli, R., Zayed, H., et al. [Antonio Giordano] (2023). Different endovascular modalities of treatment for isolated atherosclerotic popliteal artery lesions (EMO-POP) registry. J. Vasc. Surg. 77, 231–240.
January 2023
- Belfiore A, Rapicavoli RV, le Moli R, Lappano R, Morrione A, de Francesco EM, Vella V (2023) IGF2: A Role in Metastasis and Tumor Evasion from Immune Surveillance? Biomedicines 11:229.
- Ciccarelli G, Conte S, Cimmino G, Maiorano P, Morrione A, Giordano A (2023) Mitochondrial Dysfunction: The Hidden Player in the Pathogenesis of Atherosclerosis? Int J Mol Sci 24:1086.
- Fan S, Zhang J, Wang B, Chen J, Yang W, Liu W, Li Y (2023) A deep learning method for fast predicting curing process-induced deformation of aeronautical composite structures. Compos Sci Technol 232:109844.
- Liberles DA (2023) The Memory Problem for Neutral Mutational Models of Evolution. J Mol Evol 91:2–5.
- Lotta-Arévalo IA, González AD, Gamboa-Suárez BA, Pacheco MA, Escalante AA, Moreno C, Rodrìguez-Fandìño O, Cuervo A, Matta NE (2023) Haemosporidians in Non-Passerine Birds of Colombia: An Overview of the Last 20 Years of Research. Diversity (Basel) 15:57.
- Osman EO, Vohsen SA, Girard F, Cruz R, Glickman O, Bullock LM, Anderson KE, Weinnig AM, Cordes EE, Fisher CR, others (2023) Capacity of deep-sea corals to obtain nutrition from cold seeps aligned with microbiome reorganization. Glob Chang Biol 29:189–205.
- Piontek SM, Naujoks D, Tabassum T, DelloStritto MJ, Jaugstetter M, Hosseini P, Corva M, Ludwig A, Tschulik K, Klein ML, others (2023) Probing the Gold/Water Interface with Surface-Specific Spectroscopy. ACS Physical Chemistry Au.
- Salvio G, Petrelli M, Paolini S, Baldini V, Sbaffi C, Basili S, Giordano A, Balercia G, Cinti S (2023) Gender-specific effects of capsiate supplementation on body weight and bone mineral density: a randomized, double-blind, placebo-controlled study in slightly overweight women. J Endocrinol Invest:1–8.
- Scalia P, Williams SJ, Fujita-Yamaguchi Y, Giordano A (2023) Cell cycle control by the insulin-like growth factor signal: at the crossroad between cell growth and mitotic regulation. Cell Cycle 22:1–37.
- Spigler R, Charles A (2023) Inbreeding reduces floral longevity and flower size in the mixed-mating biennial Sabatia angularis. Int J Plant Sci.
- Stanhope MJ, Ceres KM, Sun Q, Wang M, Zehr JD, Marra NJ, Wilder AP, Zou C, Bernard AM, Pavinski-Bitar P, others (2023) Genomes of endangered great hammerhead and shortfin mako sharks reveal historic population declines and high levels of inbreeding in great hammerhead. iScience 26:105815.
- Stanojevic M, Andjelkovic J, Kasprowicz A, Huuki LA, Chao J, Hedges SB, Kumar S, Obradovic Z (2023) Discovering research articles containing evolutionary timetrees by machine learning. Bioinformatics.
- Suma A, Carnevale V, Micheletti C (2023) Nonequilibrium thermodynamics of DNA nanopore unzipping. Phys Rev Lett 130:48101.
- Tingey M, Ruba A, Yang W (2023) High-SPEED super-resolution SPEED microscopy to study primary cilium signaling in vivo. In: Methods in cell biology. Elsevier
- Zhang C, Yue S, Panagiotopoulos A, Klein M, Wu X (2023) Origin of the dielectric decrement of salt water. Bulletin of the American Physical Society.
Previous Years
2022
- Accarino G, Giordano AN, Falcone M, Celano A, Vassallo MG, Fornino G, Bracale UM, Vecchione C, Galasso G (2022) Abdominal aortic aneurysm: natural history, pathophysiology and translational perspectives. Translational Medicine@ UniSa 24:6.
- Adedeji Olulana, A. F., Choi, D., Inverso, V., Redhu, S. K., Vidonis, M., Crevatin, L., et al. (2022). Noncanonical DNA Cleavage by BamHI Endonuclease in Laterally Confined DNA Monolayers Is a Step Function of DNA Density and Sequence. Molecules 27, 5262.
- Ali JR, Hedges SB (2022) A review of geological evidence bearing on proposed Cenozoic land connections between Madagascar and Africa and its relevance to biogeography. Earth Sci Rev 232:104103.
- Allegretti, M., Cesta, M. C., Zippoli, M., Beccari, A., Talarico, C., Mantelli, F., et al. (2022). Repurposing the estrogen receptor modulator raloxifene to treat SARS-CoV-2 infection. Cell Death \& Differ. 29, 156–166.
- Amendola A, Canuti M, Bianchi S, Kumar S, Fappani C, Gori M, Colzani D, Pond SLK, Miura S, Baggieri M, others (2022) Molecular evidence for SARS-CoV-2 in samples collected from patients with morbilliform eruptions since late 2019 in Lombardy, northern Italy. Environ Res 215:113979.
- André, T., Diaz, L. A., and Shiu, K.-K. (2022). Crossing survival curves of KEYNOTE-177 illustrate the rationale behind combining immune checkpoint inhibition with chemotherapy--Authors’ reply. Lancet Oncol. 23, e246.
- Annunziata C, Pirozzi C, Lama A, Senzacqua M, Comella F, Bordin A, Monnolo A, Pelagalli A, Ferrante MC, Mollica MP, others (2022) Palmitoylethanolamide promotes white-to-beige conversion and metabolic reprogramming of adipocytes: contribution of PPAR-α. Pharmaceutics 14:338.
- Ashton G v, Freestone AL, Duffy JE, Torchin ME, Sewall BJ, Tracy B, Albano M, Altieri AH, Altvater L, Bastida-Zavala R, others (2022) Predator control of marine communities increases with temperature across 115 degrees of latitude. Science (1979) 376:1215–1219.
- Azofeifa-Solano JC, Pereira OS, Cowell EJ, Cordes E, Levin LA, Goffredi S, Cortés J (2022) Sexual dimorphism in the methane seep-dwelling Costa Rican yeti crab Kiwa puravida (Decapoda: Anomura: Kiwaidae). Front Mar Sci:2226.
- Babaian C (2022) Fantastic Science Communication. Am Sci 110:24–27.
- Babaian C, Kumar S (2022a) Epistasis Storyboarded. Am Biol Teach 84:562–569.
- Babaian C, Kumar S (2022b) Storyboarding for Biology: An Authentic STEAM Experience. Am Biol Teach 84:328–335.
- Badalamenti G, Giordano A, Capoluongo E, Russo A, Malapelle U, Bazan V (2022) Cell-free/circulating tumor DNA profiling: from next-generation sequencing-based to digital polymerase chain reaction-based methods. Liquid Biopsy: New Challenges in the Era of Immunotherapy and Precision Oncology:168.
- Bajic M, Ravishankar S, Sheth M, Rowe LA, Pacheco MA, Patel DS, Batra D, Loparev V, Olsen C, Escalante AA, others (2022) The first complete genome of the simian malaria parasite Plasmodium brasilianum. Sci Rep 12:19802.
- Bakouny Z, Labaki C, Grover P, Awosika J, Gulati S, Hsu C-Y, Alimohamed SI, Bashir B, Berg S, Bilen MA, others (2022) Interplay of immunosuppression and immunotherapy among patients with cancer and COVID-19. JAMA Oncol.
- Barbarino M, Bottaro M, Spagnoletti L, de Santi MM, Guazzo R, Defraia C, Custoza C, Serio G, Iannelli F, Pesetti M, others (2022) Analysis of Primary Cilium Expression and Hedgehog Pathway Activation in Mesothelioma Throws Back Its Complex Biology. Cancers (Basel) 14:5216.
- Behm JE, Bélouard N, Gleditsch JM, Phillips PM, Swartz TM (2022a) Trait-based approaches for understanding how biodiversity generates sustainable benefits in urban vegetated green infrastructure. Curr Opin Environ Sustain 57:101204.
- Behm JE, Busala GM, Helmus M, others (2022b) First records of three new lizard species and a range expansion of a fourth lizard species introduced to Aruba. Bioinvasions Rec 11.
- Benndorf R, Velazquez R, Zehr JD, Pond SLK, Martin JL, Lucaci AG (2022) Human HspB1, HspB3, HspB5 and HspB8: Shaping these disease factors during vertebrate evolution. Cell Stress Chaperones 27:309–323.
- Benot-Dominguez R, Cimini A, Barone D, Giordano A, Pentimalli F (2022) The Emerging Role of Cyclin-Dependent Kinase Inhibitors in Treating Diet-Induced Obesity: New Opportunities for Breast and Ovarian Cancers? Cancers (Basel) 14:2709.
- Bergamaschi R, Beghi E, Bosetti C, Ponzio M, Santucci C, Lepore V, Mosconi P, Sclerosis IM, Group RDRC, the Scientific Committee of Italian SM, Register RD, Aguglia U, Amato MP, others (2022) Do patients’ and referral centers’ characteristics influence multiple sclerosis phenotypes? Results from the Italian multiple sclerosis and related disorders register. Neurological Sciences 43:5459–5469.
- Berns, M. L., and Habas, R. (2022). “Biochemical Assays to Detect Activation of Small GTPases Rho, Rac Rac, and Cdc42 Cdc42 during Morphogenesis Morphogenesis,” in Cell Polarity Signaling: Methods and Protocols (Springer), 83–95.
- Bucci, E., and Carafoli, E. (2022). SCIENTIFIC FRAUD Part I: Definition, General Concepts, Historical Cases. Eur. Rev. 30, 835–849.
- Burk S, Giordano A (2022) Incidence Of Breast Cancer In Ethnic Minority Groups In North America And Populations In Western Europe. Annals of Research in Oncology:116.
- Cabezas-Bratesco D, Mcgee FA, Colenso CK, Zavala K, Granata D, Carnevale V, Opazo JC, Brauchi SE (2022) Sequence and structural conservation reveal fingerprint residues in TRP channels. Elife 11:e73645.
- Canciello A, Cerveró-Varona A, Peserico A, Mauro A, Russo V, Morrione A, Giordano A, Barboni B (2022) “In medio stat virtus”: Insights into hybrid E/M phenotype attitudes. Front Cell Dev Biol 10.
- Canuti, M., Bianchi, S., Kolbl, O., Pond, S. L. K., Kumar, S., Gori, M., et al. (2022). Waiting for the truth: is reluctance in accepting an early origin hypothesis for SARS-CoV-2 delaying our understanding of viral emergence? BMJ Glob. Heal. 7, e008386.
- Caraballo-Ortiz MA, Miura S, Sanderford M, Dolker T, Tao Q, Weaver S, Pond SLK, Kumar S (2022) TopHap: rapid inference of key phylogenetic structures from common haplotypes in large genome collections with limited diversity. Bioinformatics 38:2719–2726.
- Carafoli, E., and Bucci, E. (2022). Scientific fraud part II: From past to present, facts and analyses. Eur. Rev. 30, 850–871.
- Carbone, M., Pass, H. I., Ak, G., Alexander Jr, H. R., Baas, P., Baumann, F., et al. (2022). Medical and surgical care of mesothelioma patients and their relatives carrying germline BAP1 mutations. J. Thorac. Oncol.
- Caruso L, Castellino A, Dess\`\i D, Flenghi L, Giordano A, Ibatici A, Massone C, Pileri A, Proietti I, Pupo L, others (2022a) Italian Real-Life Experience on the Use of Mogamulizumab in Patients with Cutaneous T-Cell Lymphomas. Cancer Manag Res:3205–3221.
- Caruso M, Emma R, Distefano A, Rust S, Poulas K, Giordano A, Volarevic V, Mesiakaris K, Boffo S, Arsenijevic A, others (2022b) Comparative assessment of electronic nicotine delivery systems aerosol and cigarette smoke on endothelial cell migration: the Replica Project. Drug Test Anal.
- Cavender-Bares JM, Nelson E, Meireles JE, Lasky JR, Miteva DA, Nowak DJ, Pearse WD, Helmus MR, Zanne AE, Fagan WF, others (2022) The hidden value of trees: quantifying the ecosystem services of tree lineages and their major threats across the contiguous US. PLOS Sustainability and Transformation 1:e0000010.
- Chen Z, Ding D, Yu T, Yang W, Li Q, Li Y (2022) Enzymatic degradation behaviors and kinetics of bio-degradable jute/poly (lactic acid)(PLA) composites. Composites Communications 33:101227.
- Chen, X., Guo, J., Zhou, F., Ren, W., Pu, J., Mutti, L., et al. (2022). Over-expression of long non-coding RNA-AC099850. 3 correlates with tumor progression and poor prognosis in lung adenocarcinoma. Front. Oncol. 12.
- Chroni, A., Miura, S., Hamilton, L., Vu, T., Gaffney, S. G., Aly, V., et al. (2022). Clone Phylogenetics Reveals Metastatic Tumor Migrations, Maps, and Models. Cancers (Basel). 14, 4326. doi:10.3390/cancers14174326.
- Colleluori G, Galli C, Severi I, Perugini J, Giordano A (2022a) Early Life Stress, Brain Development, and Obesity Risk: Is Oxytocin the Missing Link? Cells 11:623.
- Colleluori G, Graciotti L, Pesaresi M, di Vincenzo A, Perugini J, di Mercurio E, Caucci S, Bagnarelli P, Zingaretti CM, Nisoli E, others (2022b) Visceral fat inflammation and fat embolism are associated with lung’s lipidic hyaline membranes in subjects with COVID-19. Int J Obes 46:1009–1017.
- Colleluori G, Perugini J, di Vincenzo A, Senzacqua M, Giordano A, Cinti S (2022d) Brown fat anatomy in humans and rodents. In: Brown Adipose Tissue: Methods and Protocols. Springer, p 19–42
- Colleluori G, Perugini J, Giordano A, Cinti S (2022c) From obesity to diabetes: the role of the adipose organ. From Obesity to Diabetes:75–92.
- Coppi, L., Peri, C., Bonacina, F., Longo, R., Cricr\’\i, D., Pedretti, S., et al. (2022). Role of histone deacetylase 3 (HDAC3) in adipose tissue metabolism and immunophenotype: Selected Abstract-SITeCS Congress 2022. Eur. Atheroscler. J. 1.
- Coronel L, Carnevale V (2022) Allosteric metamaterials: leveraging the enthalpy-entropy competition to mimic the responsiveness of biomolecules to external stimuli. Biophys J 121:65a.
- Correale P, Pentimalli F, Nardone V, Giordano A, Mutti L (2022) CONFIRM trial: what is the real efficacy of second-line immunotherapy in mesothelioma? Lancet Oncol 23:e13.
- Costa A, Forte IM, Ventura E, Pentimalli F, Giordano A (2022) Pharmacological reactivation of RBL2/p130 could be an effective antitumoral strategy for malignant pleural mesothelioma. The FASEB Journal 36.
- Cox N, Young BE, Bowles P, Fernandez M, Marin J, Rapacciuolo G, Böhm M, Brooks TM, Hedges SB, Hilton-Taylor C, others (2022) A global reptile assessment highlights shared conservation needs of tetrapods. Nature 605:285–290.
- Craig JM, Kumar S, Hedges SB (2022) Limitations of phylogenomic data can drive inferred speciation rate shifts. Mol Biol Evol 39:msac038.
- Darbinian N, Darbinyan A, Sinard J, Tatevosian G, Merabova N, D’Amico F, Khader T, Bajwa A, Martirosyan D, Gawlinski AK, others (2022) Molecular Markers in Maternal Blood Exosomes Allow Early Detection of Fetal Alcohol Spectrum Disorders. Int J Mol Sci 24:135.
- de Almeida NCV, Louzada J, Neves MSAS, Carvalho TM, Castro-Alves J, Silva-do-Nascimento TF, Escalante AA, Oliveira-Ferreira J (2022) Larval habitats, species composition and distribution of malaria vectors in regions with autochthonous and imported malaria in Roraima state, Brazil. Malar J 21:1–16.
- de Klerk A, Swanepoel P, Lourens R, Zondo M, Abodunran I, Lytras S, MacLean OA, Robertson D, Kosakovsky Pond SL, Zehr JD, others (2022) Conserved recombination patterns across coronavirus subgenera. Virus Evol 8:veac054.
- Dell’Anno I, Melani A, Martin SA, Barbarino M, Silvestri R, Cipollini M, Giordano A, Mutti L, Nicolini A, Luzzi L, others (2022) A Drug Screening Revealed Novel Potential Agents against Malignant Pleural Mesothelioma. Cancers (Basel) 14:2527.
- Dellostritto M, Percec S, Klein M (2022) Illuminating Stress and Failure in Polyethylene with a Neural Network Potential. In: APS March Meeting Abstracts. p W16–009
- di Fiore R, Suleiman S, Drago-Ferrante R, Subbannayya Y, Pentimalli F, Giordano A, Calleja-Agius J (2022) Cancer Stem cells and their possible implications in Cervical Cancer: a short review. Int J Mol Sci 23:5167.
- Distefano A, Caruso M, Emma R, Rust S, Poulas K, Zadjali F, Boffo S, Volarevic V, Mesiakaris K, Karanasios G, others (2022) Electronic Nicotine Delivery Systems Exhibit LowerToxicity Compared to Cigarettes:“The Replica Study Experience”. The FASEB Journal 36.
- Doughan A, Salifu SP (2022) Genes associated with diagnosis and prognosis of Burkitt lymphoma. IET Syst Biol 16:220–229.
- Ducci G, Pasquale V, Rota S, Arrigoni E, Campioni G, Ventura E, Giordano A, Morrione A, Sacco E, Vanoni M (2022) Profiling Metabolic and Signaling Phenotype of Bladder Cancer Cell Lines. The FASEB Journal 36.
- Dutta A, Tapio K, Suma A, Mostafa A, Kanehira Y, Carnevale V, Bussi G, Bald I (2022) Molecular states and spin crossover of hemin studied by DNA origami enabled single-molecule surface-enhanced Raman scattering. Nanoscale 14:16467–16478.
- Emont MP, Jacobs C, Essene AL, Pant D, Tenen D, Colleluori G, di Vincenzo A, Jørgensen AM, Dashti H, Stefek A, others (2022) A single-cell atlas of human and mouse white adipose tissue. Nature 603:926–933.
- Escalante AA, Cepeda AS, Pacheco MA (2022) Why Plasmodium vivax and Plasmodium falciparum are so different? A tale of two clades and their species diversities. Malar J 21:1–19.
- Fameli A, Nardone V, Azgomi MS, Bianco G, Gandolfo C, Oliva BM, Monoriti M, Saladino RE, Falzea A, Romeo C, others (2022) PD-1/PD-L1 immune-checkpoint blockade induces immune effector cell modulation in metastatic non-small cell lung cancer patients: A single-cell flow cytometry approach. Front Oncol 12.
- Feitelson MA, Arzumanyan A, Spector I, Medhat A (2022) Hepatitis B x (HBx) as a Component of a Functional Cure for Chronic Hepatitis B. Biomedicines 10:2210.
- Fiorillo A, Giordano A (2022) The biopsychosocial model of schizophrenia and cancer: Unraveling the etiopathogenesis of complex diseases. European Psychiatry:1–5.
- Foutel-Rodier, F., Blanquart, F., Courau, P., Czuppon, P., Duchamps, J.-J., Gamblin, J., et al. (2022). From individual-based epidemic models to McKendrick-von Foerster PDEs: A guide to modeling and inferring COVID-19 dynamics. J. Math. Biol. 85, 43.
- Fu J, Reid SA, French B, Hennessy C, Hwang C, Gatson NT, Duma N, Mishra S, Nguyen R, Hawley JE, others (2022) Racial disparities in COVID-19 outcomes among black and white patients with cancer. JAMA Netw Open 5:e224304–e224304.
- Gabbianelli R, Giordano A, Guerrieri M, Lezoche G, di Mercurio E, Petracci I, Perugini J, Bordoni L (2022) Mitochondrial DNA in visceral adipose tissue in severe obesity: from copy number to D-loop methylation. Frontiers in Bioscience-Landmark 27:172.
- Gallagher S, Carnevale V (2022) Modeling ion channel clustering using critical phenomena. Biophys J 121:371a.
- Gasbarro R, Sowers D, Margolin A, Cordes EE (2022) Distribution and predicted climatic refugia for a reef-building cold-water coral on the southeast US margin. Glob Chang Biol 28:7108–7125.
- Giordano A, Cinti F, Canese R, Carpinelli G, Colleluori G, di Vincenzo A, Palombelli G, Severi I, Moretti M, Redaelli C, others (2022a) The Adipose Organ Is a Unitary Structure in Mice and Humans. Biomedicines 10:2275.
- Giordano A, Pagano L (2022) The Treatment of Advanced-Stage Mycosis Fungoides and Sezary Syndrome: a Hematologist’s Point of View. Mediterr J Hematol Infect Dis 14.
- Giordano A, Rucci N, Falone S (2022b) Extracellular vesicles as modulators of cancer cell adaptive responses linked to therapy resistance. Front Oncol:6870.
- Gleditsch JM, Behm JE, Ellers J, Jesse WAM, Helmus MR (2022) Contemporizing island biogeography theory with anthropogenic drivers of species richness. Global Ecology and Biogeography.
- Gómez CE, Gori A, Weinnig AM, Hallaj A, Chung HJ, Cordes EE (2022) Natural variability in seawater temperature compromises the metabolic performance of a reef-forming cold-water coral with implications for vulnerability to ongoing global change. Coral Reefs 41:1225–1237.
- Grattepanche J-D, Jeffrey WH, Gast RJ, Sanders RW (2022) Diversity of microbial eukaryotes along the West Antarctic peninsula in austral spring. Front Microbiol 13:844856.
- Grillo E, Ravelli C, Colleluori G, D’Agostino F, Domenichini M, Giordano A, Mitola S (2022) Role of gremlin-1 in the pathophysiology of the adipose tissues. Cytokine Growth Factor Rev:S1359–6101.
- Gutierrez-Velez VH, Gilbert MR, Kinsey D, Behm JE (2022) Beyond the ‘urban’and the ‘rural’: conceptualizing a new generation of infrastructure systems to enable rural–urban sustainability. Curr Opin Environ Sustain 56:101177.
- Harman J, Hipsley CA, Jacobus LM, Liberles DA, Settele J, Traulsen A (2022) 2022 BMC Ecology and Evolution image competition: the winning images. BMC Ecol Evol 22:99.
- Hawley JE, Sun T, Chism DD, Duma N, Fu JC, Gatson NTN, Mishra S, Nguyen RH, Reid SA, Serrano OK, others (2022) Assessment of regional variability in COVID-19 outcomes among patients with cancer in the United States. JAMA Netw Open 5:e2142046–e2142046.
- He J, Yu T, Yang W, Li Y (2022) Biodegradable star-shaped poly (lactic acid): Synthesis, characterization and its reaction kinetics. J Polym Environ 30:3121–3128.
- Hedges SB (2022) A new species of frog from the Caribbean island of Montserrat (Eleutherodactylidae, Eleutherodactylus). Zootaxa 5219:375–387.
- Henry CN, Piper K, Wilson AE, Miraszek JL, Probst CS, Rong Y, Liberles DA (2022) WGDTree: a phylogenetic software tool to examine conditional probabilities of retention following whole genome duplication events. BMC Bioinformatics 23:1–15.
- Huron NA, Behm JE, Helmus MR (2022) Paninvasion severity assessment of a US grape pest to disrupt the global wine market. Commun Biol 5:655.
- Huzar J, Kim H, Kumar S, Miura S (2022) MOCA for Integrated Analysis of Gene Expression and Genetic Variation in Single Cells. Front Genet 13.
- Iaconis, D., Bordi, L., Matusali, G., Talarico, C., Manelfi, C., Cesta, M. C., et al. (2022). Characterization of raloxifene as a potential pharmacological agent against SARS-CoV-2 and its variants. Cell Death \& Dis. 13, 498.
- Infante MS, Salmanton-Garc\’\ia J, Fernandez-Cruz A, Marchesi F, Jaksic O, Weinbergerova B, Besson C, Duarte RF, Itri F, Valković T, others (2022) B-cell malignancies treated with targeted drugs and SARS-CoV-2 infection: A European Hematology Association Survey (EPICOVIDEHA). Front Oncol 12.
- Intiso D, Centra AM, Giordano A, Santamato A, Amoruso L, di Rienzo F (2022) Critical illness polyneuropathy and functional outcome in subjects with COVID-19: report on four patients and a scoping review of the literature. J Rehabil Med 54.
- Islam MS, Junod SL, Zhang S, Buuh ZY, Guan Y, Zhao M, Kaneria KH, Kafley P, Cohen C, Maloney R, others (2022) Unprotected peptide macrocyclization and stapling via a fluorine-thiol displacement reaction. Nat Commun 13:350.
- Järvinen, K. M., Davis, E. C., Bevec, E., Jackson, C. M., Pizzarello, C., Catlin, E., et al. (2022). Biomarkers of development of immunity and allergic diseases in farming and non-farming lifestyle infants: design, methods and 1 year outcomes in the “Zooming in to Old Order Mennonites” birth cohort study. Front. Pediatr. 10, 916184.
- Jarzyna MA, Norman KEA, LaMontagne JM, Helmus MR, Li D, Parker SM, Perez Rocha M, Record S, Sokol ER, Zarnetske PL, others (2022) Community stability is related to animal diversity change. Ecosphere 13:e3970.
- Jiang, X., Chen, X., Guo, J., Zhou, F., Pu, J., Mutti, L., et al. (2022). Identification and Validation of lncRNA-AC087588. 2 in Lung Adenocarcinoma: A Novel Prognostic and Diagnostic Indicator. Front. Mol. Biosci. 9.
- Jiang, Z., El-Brolosy, M. A., Serobyan, V., Welker, J. M., Retzer, N., Dooley, C. M., et al. (2022). Parental mutations influence wild-type offspring via transcriptional adaptation. Sci. Adv. 8, eabj2029.
- Johnstone JW, Lunden JJ, Waller RG, Poulton NJ, Togami H (2022) Antarctic deep-sea coral larvae may be resistant to end-century ocean warming. Coral Reefs 41:1495–1510.
- Kalvaityté, M., and Balciunas, D. (2022). Conditional mutagenesis strategies in zebrafish. Trends Genet.
- Kaur H, Pacheco MA, Garber L, Escalante AA, Vinetz JM (2022) Evolutionary Insights into the Microneme-Secreted, Chitinase-Containing High-Molecular-Weight Protein Complexes Involved in Plasmodium Invasion of the Mosquito Midgut. Infect Immun 90:e00314–21.
- Kawamoto S, Liu H, Miyazaki Y, Seo S, Dixit M, DeVane R, MacDermaid C, Fiorin G, Klein ML, Shinoda W (2022) SPICA force field for proteins and peptides. J Chem Theory Comput 18:3204–3217.
- Krishnamurthy R, Goldman AD, Liberles DA, Rogers KL, Tor Y (2022) Nucleobases in Meteorites to Nucleobases in RNA and DNA? J Mol Evol 90:328–331.
- Kumar Sudhir (2022) Embracing green computing in molecular phylogenetics. Mol Biol Evol 39: msac043.
- Kumar S, Suleski M, Craig JM, Kasprowicz AE, Sanderford M, Li M, Stecher G, Hedges SB (2022) TimeTree 5: An expanded resource for species divergence times. Mol Biol Evol 39:msac174.
- la Puente A, Ventura J, Miñarro M, Somoano A, Hey J, Castresana J (2022) Divergence time estimation using ddRAD data and an isolation-with-migration model applied to water vole populations of Arvicola. Sci Rep 12:4065.
- Lama A, Pirozzi C, Severi I, Morgese MG, Senzacqua M, Annunziata C, Comella F, del Piano F, Schiavone S, Petrosino S, others (2022) Palmitoylethanolamide dampens neuroinflammation and anxiety-like behavior in obese mice. Brain Behav Immun 102:110–123.
- Landoni, G., Piemonti, L., Monforte, A. d’Arminio, Grossi, P., Zangrillo, A., Bucci, E., et al. (2022). A multicenter phase 2 randomized controlled study on the efficacy and safety of reparixin in the treatment of hospitalized patients with COVID-19 pneumonia. Infect. Dis. Ther. 11, 1559–1574.
- Lewkiewicz SM, de Bona S, Helmus MR, Seibold B (2022) Temperature sensitivity of pest reproductive numbers in age-structured PDE models, with a focus on the invasive spotted lanternfly. J Math Biol 85:29.
- Li D, Record S, Sokol ER, Bitters ME, Chen MY, Chung YA, Helmus MR, Jaimes R, Jansen L, Jarzyna MA, others (2022) Standardized NEON organismal data for biodiversity research. Ecosphere 13:e4141.
- Li, H., Yang, W., Ma, Q., Qian, Z., and Yang, L. (2022). Specific Sensitivity Analysis and Imitative Full Stress Method for Optimal BCCZ Lattice Structure by Additive Manufacturing. Crystals 12, 1844.
- Liu M, Chen Y, Cheng W, Chen S, Yu T, Yang W (2022a) Controllable electromechanical stability of a torsional micromirror actuator with piezoelectric composite structure under capillary force. Capillarity 5:51–64.
- Liu S, Behm JE, Meng Y, Zhang W, Xia S, Yang X, Fu S (2022b) Nitrogen addition enhances the bottom-up effects in the detrital food web. Glob Ecol Conserv 39:e02299.
- Liu S, Meng Y, Behm JE, Zhang W, Fu S (2022c) Canopy nitrogen addition affects ground-dwelling spider assemblages and trophic position. Insect Conserv Divers.
- Liu S, Xia S, Wu D, Behm JE, Meng Y, Yuan H, Wen P, Hughes AC, Yang X (2022d) Understanding global and regional patterns of termite diversity and regional functional traits. iScience 25:105538.
- Liu W, Fan X, Jung J-H, Grattepanche J-D (2022e) Ciliates: Key Organisms in Aquatic Environments. Front Microbiol 13.
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